Loading presentation...

Present Remotely

Send the link below via email or IM


Present to your audience

Start remote presentation

  • Invited audience members will follow you as you navigate and present
  • People invited to a presentation do not need a Prezi account
  • This link expires 10 minutes after you close the presentation
  • A maximum of 30 users can follow your presentation
  • Learn more about this feature in our knowledge base article

Do you really want to delete this prezi?

Neither you, nor the coeditors you shared it with will be able to recover it again.


No description

Roderic Page

on 10 February 2014

Comments (0)

Please log in to add your comment.

Report abuse

Transcript of

Biodiversity Knowledge Graph
Citation graph
Cameron, R. D. (1997). A Universal Citation Database. First Monday, 2(4). doi:10.5210/fm.v2i4.522
Shotton, D. (2013). Publishing: Open citations. Nature, 502(7471), 295–297. doi:10.1038/502295a
Identifiers from ORCID, DOI, and ISSN, services from CrossRef
... and a large number of third-party databases build on these identifiers
NCBI manages their own identifiers...
Markup for display
Markup for archiving
JATS XML can be redisplayed in interesting ways
Articles extracted from BHL should be archived (e.g., PubMed Central)
Do we need markup?
Just need to extract entities and assertions
Questions are paths in the knowledge graph
Spatial search
Markup for citation linking
Easy markup use cases

archive of articles
displaying articles
citation linking

What do I want?
extract named entities, identifiers, localities
extract relationships (e.g., these names are synonyms)
in other words, extract edges in the knowledge graph
My questions:
Do we need markup, or is indexing good enough?

Markup for archiving, or better still, for version controlled editing

Does markup generate knowledge?
If so, what have we learnt to date from marked up literature?
Who builds the knowledge graph?
Full transcript